Today I’d like to introduce a new chemical compound, CAS is 1953146-81-0, Recommanded Product: 1953146-81-0, Name is 36-(((2R,3R,4R,5R,6R)-3-Acetamido-4,5-dihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl)oxy)-21,21-bis((3-((3-(5-(((2R,3R,4R,5R,6R)-3-acetamido-4,5-dihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl)oxy)pentanamido)propyl)amino)-3-oxopropoxy)methyl)-19,26,32-trioxo-4,7,10,13,16,23-hexaoxa-20,27,31-triazahexatriacontan-1-oic acid, Formula is C75H134N10O35, Molecular Weight is 1735.91g/mol. Because of its complex structure and huge molecular weight, this compound is rarely understood. Now let me introduce some knowledge about its synthesis.
The general reactant of this compound is 1-[(3R,5S)-5-[[Bis(4-methoxyphenyl)phenylmethoxy]methyl]-1-[1,12,19,25-tetraoxo-14,14-bis[[3-oxo-3-[[3-[[1-oxo-5-[[3,4,6-tri-O-acetyl-2-(acetylamino)-2-deoxy-β-D-galactopyranosyl]oxy]pentyl]amino]propyl]amino]propoxy]methyl]-29-[[3,4,6-tri-O-acetyl-2-(acetylamino)-2-deoxy-β-D-galactopyranosyl]oxy]-16-oxa-13,20,24-triazanonacos-1-yl]-3-pyrrolidinyl] butanedioate;Adenosine, N-benzoyl-5′-O-[bis(4-methoxyphenyl)phenylmethyl]-2′-deoxy-, 3′-[2-cyanoethyl N,N-bis(1-methylethyl)phosphoramidite]；Adenosine, N-benzoyl-5′-O-[bis(4-methoxyphenyl)phenylmethyl]-2′-O-methyl-, 3′-[2-cyanoethyl N,N-bis(1-methylethyl)phosphoramidite]；Uridine, 5′-O-[bis(4-methoxyphenyl)phenylmethyl]-2′-deoxy-, 3′-[2-cyanoethyl N,N-bis(1-methylethyl)phosphoramidite]；Cytidine, N-acetyl-5′-O-[bis(4-methoxyphenyl)phenylmethyl]-2′-O-methyl-, 3′-[2-cyanoethyl N,N-bis(1-methylethyl)phosphoramidite]；Uridine, 5′-O-[bis(4-methoxyphenyl)phenylmethyl]-2′-O-methyl-, 3′-[2-cyanoethyl N,N-bis(1-methylethyl)phosphoramidite], Reagents is Methylamine, Triethylamine trihydrofluoride, Catalyst(), Solvent is Pyridine；Water, Products RNA, ((2′-deoxy-2′-fluoro)A-sp-Am-sp-(2′-deoxy-2′-fluoro)C-Am-(2′-deoxy-2′-fluoro)G-Um-(2′-deoxy-2′-fluoro)G-Um-(2′-deoxy-2′-fluoro)U-(2′-deoxy-2′-fluoro)C-(2′-deoxy-2′-fluoro)U-Um-(2′-deoxy-2′-fluoro)G-Cm-(2′-deoxy-2′-fluoro)U-Cm-(2′-deoxy-2′-fluoro)U-Am-(2′-deoxy-2′-fluoro)U-Am-(2′-deoxy-2′-fluoro)A), 3′-[[(2S,4R)-1-[29-[[2-(acetylamino)-2-deoxy-β-D-galactopyranosyl]oxy]-14,14-bis[[3-[[3-[[5-[[2-(acetylamino)-2-deoxy-β-D-galactopyranosyl]oxy]-1-oxopentyl]amino]propyl]amino]-3-oxopropoxy]methyl]-1,12,19,25-tetraoxo-16-oxa-13,20,24-triazanonacos-1-yl]-4-hydroxy-2-pyrrolidinyl]methyl hydrogen phosphate], complex with RNA (Um-sp-(2′-deoxy-2′-fluoro)U-sp-Am-(2′-deoxy-2′-fluoro)U-Am-Gm-Am-Gm-Cm-Am-Am-Gm-Am-(2′-deoxy-2′-fluoro)A-Cm-(2′-deoxy-2′-fluoro)A-Cm-(2′-deoxy-2′-fluoro)U-Gm-(2′-deoxy-2′-fluoro)U-Um-sp-Um-sp-Um) (1:1), Synthetic Methods procedure :1. Synthesize sense and antisense strands on an ABI synthesizer using commercially available 5′-O- ( 4, 4′-dimethoxytrityl ) -2′-deoxy-2′-fluoro-, 5′-O- ( 4, 4′-dimethoxytrityl ) -2′-O- ( tert-butyldimethylsilyl ) -, and 5′-O- ( 4, 4′-dimethoxytrityl ) -2′-O-methyl- 3′-O- ( 2-cyanoethyl-N, N-diisopropyl ) phosphoramidite monomers of uridine, 4-N-acetylcytidine, 6-N-benzoyladenosine, and 2-N-isobutyrylguanosine using standard solid-phase oligonucleotide synthesis and deprotection protocols., 2. Add phosphorothioate linkages by oxidation of phosphite utilizing 0.1 M DDTT in pyridine., 3. Treat the support with 40% aqueous methylamine at 45 °C for 1.5 hour., 4. Filter the suspension through a 0.2-μm filter to remove solid residues., 5. Vortex the combined filtrate with Et3N·3HF at 40 °C for 1 hour to remove tert-butyldimethylsilyl ( TBDMS ) protecting groups from the oligonucleotide., 6. Purify the ligand-conjugated and unconjugated oligonucleotides by anion-exchange high-performance liquid chromatography ( IEX-HPLC ) with TSK-Gel Super Q-5PW support using a linear gradient of 22-42% buffer B over 130 min with 50 ml/min flow rate., 7. Use buffer A as 0.02 M Na2HPO4 in 10% CH3CN ( pH 8.5 ) and buffer B as buffer A plus 1 M NaBr., 8. Combine the pure fractions, concentrate and desalt on a sartorius ultrafiltration station., 9. Confirm the integrities of the purified oligonucleotides by LC-MS and by analytical IEX HPLC., 10. Mix equimolar amounts of complementary sense and antisense strands, anneal by heating to 90 °C and cool slowly., Transfornation (.
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Reference:
CAS Reaction Number: 31-355-CAS-9994399,
,CAS Method Number: 3-614-CAS-3165786